[](http://cran.rstudio.com/web/packages/ggseqlogo/index.html) [](http://cran.rstudio.com/web/packages/ggseqlogo/index.html) ggseqlogo is an R package for generating publication-ready sequence logos using ggplot2. ## Getting started First install `ggseqlogo` from github using the `devtools` package: ```r devtools::install_github("omarwagih/ggseqlogo") ``` Load up the package and sample data ```r # Load the required packages require(ggplot2) require(ggseqlogo) # Some sample data data(ggseqlogo_sample) ``` Then draw a sequence logo ```r # Plot DNA sequence logo for transcription factor - data from JASPAR ggseqlogo( seqs_dna$MA0001.1 ) # Plot protein sequence logo for kinase target phosphosites ggseqlogo( seqs_aa$AKT1 ) ``` For more examples, and a list of features **[see the full tutorial here](http://omarwagih.github.io/ggseqlogo/)**. ## Tutorial A detailed tutorial on how to use ggseqlogo **[can be found here](http://omarwagih.github.io/ggseqlogo/)**. ## Citation If you use ggseqlogo, please cite: Wagih, Omar. ggseqlogo: a versatile R package for drawing sequence logos. _Bioinformatics_ 33, no. 22 (2017): 3645-3647. [https://doi.org/10.1093/bioinformatics/btx469](https://doi.org/10.1093/bioinformatics/btx469) PMID: [29036507](https://www.ncbi.nlm.nih.gov/pubmed/29036507) ## Feedback If you have any feedback or suggestions, drop me a line at (omarwagih(at)gmail.com) or open an issue on github.