-
-
gxf2bed Public
Forked from alejandrogzi/gxf2bedfastest GTF/GFF-to-BED converter chilling around
Rust MIT License UpdatedFeb 14, 2026 -
hpc-help Public
Forked from cropgeeks/hpc-helpHelp documentation for https://help.cropdiversity.ac.uk
Python UpdatedFeb 10, 2026 -
-
stardist Public
Forked from stardist/stardistStarDist - Object Detection with Star-convex Shapes
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 30, 2025 -
IsoformSwitchAnalyzeR Public
Forked from kvittingseerup/IsoformSwitchAnalyzeRAn R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
R UpdatedMar 24, 2025 -
lapa Public
Forked from mortazavilab/lapaAlternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.
Jupyter Notebook UpdatedJan 29, 2025 -
-
bugv Public
Forked from jiajinbu/bugvpython genome visualization package
Python UpdatedOct 21, 2024 -
seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
R Other UpdatedSep 12, 2024 -
-
LncPipe_likelet Public
Forked from likelet/LncPipeGroovy GNU Lesser General Public License v3.0 UpdatedMar 20, 2023 -
nanotail Public
Forked from smaegol/nanotailR package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions
R GNU General Public License v3.0 UpdatedFeb 11, 2023 -
tailfindr Public
Forked from adnaniazi/tailfindrAn R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.
R GNU General Public License v3.0 UpdatedJan 15, 2023 -
QuPath_Podocyte Public
Scripts for running podocyte segmentation and IF quantification in QuPath
Groovy UpdatedNov 11, 2022 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedSep 20, 2022 -
idep Public
Forked from iDEP-SDSU/idepIntegrated Differential Expression and Pathway analysis
R UpdatedSep 16, 2022 -
circlncRNAnet Public
Forked from smw1414/circlncRNAnetAn integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs
R UpdatedSep 15, 2022 -
flair Public
Forked from BrooksLabUCSC/flairFull-Length Alternative Isoform analysis of RNA
Python Other UpdatedDec 26, 2020 -
nanocompore Public
Forked from tleonardi/nanocomporeRNA modifications detection from Nanopore dRNA-Seq data
Python GNU General Public License v3.0 UpdatedJun 5, 2020
