diff --git a/lib/interface/cli/commands/pipeline/run.base.js b/lib/interface/cli/commands/pipeline/run.base.js
index 8b40ed323..2dd16d0e7 100644
--- a/lib/interface/cli/commands/pipeline/run.base.js
+++ b/lib/interface/cli/commands/pipeline/run.base.js
@@ -1,6 +1,6 @@
 const _ = require('lodash');
 const Promise = require('bluebird');
-const { prepareKeyValueFromCLIEnvOption } = require('../../helpers/general');
+const { prepareKeyValueFromCLIEnvOption, prepareKeyValueObjectsFromCLIEnvOption } = require('../../helpers/general');
 const { validatePipelineYaml } = require('../../helpers/validation');
 const { printResult } = require('../root/validate.cmd');
 const CFError = require('cf-errors');
@@ -63,9 +63,12 @@ class RunBaseCommand {
                 this.executionRequests.push(request);
             });
         } else {
-            const variables = prepareKeyValueFromCLIEnvOption(this.argv.variable);
+            const variables = prepareKeyValueObjectsFromCLIEnvOption(this.argv.variable);
+            const secrets = prepareKeyValueObjectsFromCLIEnvOption(this.argv.secret).map((secret) => {
+                return { ...secret, encrypted: true };
+            });
             const request = _.cloneDeep(executionRequestTemplate);
-            request.options.variables = variables;
+            request.options.variables = variables.concat(secrets);
             request.options.contexts = contexts;
             this.executionRequests.push(request);
         }
diff --git a/lib/interface/cli/commands/pipeline/run.cmd.js b/lib/interface/cli/commands/pipeline/run.cmd.js
index 7a63157ff..43acd3723 100644
--- a/lib/interface/cli/commands/pipeline/run.cmd.js
+++ b/lib/interface/cli/commands/pipeline/run.cmd.js
@@ -86,6 +86,11 @@ const run = new Command({
                 default: [],
                 alias: 'v',
             })
+            .option('secret', {
+                describe: 'Set build secrets',
+                default: [],
+                alias: 'S',
+            })
             .option('detach', {
                 alias: 'd',
                 describe: 'Run pipeline and print build ID',
diff --git a/package.json b/package.json
index 3d29da6c1..6a01dc69e 100644
--- a/package.json
+++ b/package.json
@@ -1,6 +1,6 @@
 {
   "name": "codefresh",
-  "version": "0.88.6",
+  "version": "0.89.0",
   "description": "Codefresh command line utility",
   "main": "index.js",
   "preferGlobal": true,