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Mark Needham
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generify jupyter execution|
1 parent bf6785a commit 0f67a62

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6 files changed

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-157
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6 files changed

+111
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lines changed

‎generate_notebooks.sh‎

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Original file line numberDiff line numberDiff line change
@@ -59,40 +59,12 @@ python generate_notebook.py \
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python generate_notebook.py \
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"Triangle Counting" \
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"https://github.com/neo4j-contrib/neo4j-graph-algorithms/blob/3.2/doc/asciidoc/triangleCount.adoc" \
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"https://github.com/neo4j-contrib/neo4j-graph-algorithms/raw/3.2/doc/asciidoc/triangleCount.adoc" \
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"https://github.com/neo4j-contrib/neo4j-graph-algorithms/raw/3.2/doc/asciidoc/scripts/triangle-count.cypher" \
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"stream-triples"
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/PageRank.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/Louvain.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/BetweennessCentrality.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/ClosenessCentrality.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/UnweightedConnectedComponents.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/WeightedConnectedComponents.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/Louvain.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/SingleSourceShortestPath.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/AllPairsShortestPath.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/TriangleCounting.ipynb
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python empty.py
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jupyter nbconvert --execute --inplace notebooks/StronglyConnectedComponents.ipynb
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for file in `find notebooks -name "*.ipynb" -maxdepth 1`; do
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echo $file
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python empty.py
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jupyter nbconvert --execute --inplace $file
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done

‎notebooks/AllPairsShortestPath.ipynb‎

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@@ -124,111 +124,111 @@
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" <tbody>\n",
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" <tr>\n",
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" <th>0</th>\n",
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" <td>B</td>\n",
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" <td>B</td>\n",
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" <td>E</td>\n",
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" <td>E</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>1</th>\n",
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" <td>B</td>\n",
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" <td>D</td>\n",
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" <td>E</td>\n",
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" <td>F</td>\n",
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" <td>40.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>2</th>\n",
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" <td>B</td>\n",
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" <td>E</td>\n",
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" <td>70.0</td>\n",
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" <td>D</td>\n",
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" <td>D</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>3</th>\n",
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" <td>B</td>\n",
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" <td>F</td>\n",
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" <td>110.0</td>\n",
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" <td>F</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>4</th>\n",
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" <td>A</td>\n",
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" <td>A</td>\n",
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" <td>0.0</td>\n",
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" <td>D</td>\n",
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" <td>E</td>\n",
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" <td>30.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>5</th>\n",
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" <td>A</td>\n",
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" <td>B</td>\n",
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" <td>50.0</td>\n",
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" <td>D</td>\n",
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" <td>F</td>\n",
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" <td>70.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>6</th>\n",
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" <td>A</td>\n",
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" <td>C</td>\n",
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" <td>50.0</td>\n",
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" <td>B</td>\n",
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" <td>D</td>\n",
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" <td>40.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>7</th>\n",
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" <td>A</td>\n",
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" <td>D</td>\n",
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" <td>90.0</td>\n",
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" <td>B</td>\n",
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" <td>E</td>\n",
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" <td>70.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>8</th>\n",
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" <td>A</td>\n",
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" <td>E</td>\n",
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" <td>120.0</td>\n",
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" <td>B</td>\n",
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" <td>F</td>\n",
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" <td>110.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>9</th>\n",
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" <td>A</td>\n",
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" <td>F</td>\n",
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" <td>160.0</td>\n",
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" <td>B</td>\n",
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" <td>B</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>10</th>\n",
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" <td>A</td>\n",
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" <td>D</td>\n",
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" <td>D</td>\n",
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" <td>0.0</td>\n",
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" <td>90.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>11</th>\n",
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" <td>D</td>\n",
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" <td>A</td>\n",
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" <td>E</td>\n",
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" <td>30.0</td>\n",
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" <td>120.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>12</th>\n",
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" <td>D</td>\n",
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" <td>A</td>\n",
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" <td>F</td>\n",
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" <td>70.0</td>\n",
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" <td>160.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>13</th>\n",
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" <td>C</td>\n",
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" <td>C</td>\n",
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" <td>A</td>\n",
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" <td>A</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>14</th>\n",
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" <td>C</td>\n",
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" <td>D</td>\n",
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" <td>40.0</td>\n",
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" <td>A</td>\n",
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" <td>B</td>\n",
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" <td>50.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>15</th>\n",
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" <td>E</td>\n",
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" <td>E</td>\n",
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" <td>0.0</td>\n",
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" <td>A</td>\n",
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" <td>C</td>\n",
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" <td>50.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>16</th>\n",
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" <td>C</td>\n",
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" <td>E</td>\n",
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" <td>70.0</td>\n",
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" <td>D</td>\n",
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" <td>40.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>17</th>\n",
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" <td>C</td>\n",
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" <td>E</td>\n",
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" <td>F</td>\n",
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" <td>40.0</td>\n",
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" <td>70.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>18</th>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>19</th>\n",
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" <td>F</td>\n",
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" <td>F</td>\n",
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" <td>C</td>\n",
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" <td>C</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" </tbody>\n",
@@ -248,26 +248,26 @@
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],
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"text/plain": [
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" source target distance\n",
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"0 B B 0.0\n",
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"1 B D 40.0\n",
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"2 B E 70.0\n",
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"3 B F 110.0\n",
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"4 A A 0.0\n",
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"5 A B 50.0\n",
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"6 A C 50.0\n",
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"7 A D 90.0\n",
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"8 A E 120.0\n",
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"9 A F 160.0\n",
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"10 D D 0.0\n",
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"11 D E 30.0\n",
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"12 D F 70.0\n",
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"13 C C 0.0\n",
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"14 C D 40.0\n",
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"15 E E 0.0\n",
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"16 C E 70.0\n",
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"17 E F 40.0\n",
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"0 E E 0.0\n",
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"1 E F 40.0\n",
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"2 D D 0.0\n",
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"3 F F 0.0\n",
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"4 D E 30.0\n",
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"5 D F 70.0\n",
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"6 B D 40.0\n",
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"7 B E 70.0\n",
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"8 B F 110.0\n",
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"9 B B 0.0\n",
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"10 A D 90.0\n",
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"11 A E 120.0\n",
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"12 A F 160.0\n",
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"13 A A 0.0\n",
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"14 A B 50.0\n",
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"15 A C 50.0\n",
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"16 C D 40.0\n",
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"17 C E 70.0\n",
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"18 C F 110.0\n",
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"19 F F 0.0"
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"19 C C 0.0"
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]
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},
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"execution_count": 4,

‎notebooks/BetweennessCentrality.ipynb‎

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@@ -137,22 +137,22 @@
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" </tr>\n",
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" <tr>\n",
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" <th>2</th>\n",
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" <td>Bridget</td>\n",
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" <td>Mark</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>3</th>\n",
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" <td>Doug</td>\n",
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" <td>Michael</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>4</th>\n",
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" <td>Mark</td>\n",
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" <td>Bridget</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>5</th>\n",
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" <td>Michael</td>\n",
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" <td>Doug</td>\n",
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" <td>0.0</td>\n",
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" </tr>\n",
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" </tbody>\n",
@@ -163,10 +163,10 @@
163163
" user centrality\n",
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"0 Alice 4.0\n",
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"1 Charles 2.0\n",
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"2 Bridget 0.0\n",
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"3 Doug 0.0\n",
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"4 Mark 0.0\n",
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"5 Michael 0.0"
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"2 Mark 0.0\n",
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"3 Michael 0.0\n",
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"4 Bridget 0.0\n",
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"5 Doug 0.0"
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]
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},
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"execution_count": 4,

‎notebooks/Louvain.ipynb‎

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" <tbody>\n",
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" <tr>\n",
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" <th>0</th>\n",
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" <td>Doug</td>\n",
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" <td>Alice</td>\n",
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" <td>0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>1</th>\n",
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" <td>Mark</td>\n",
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" <td>Bridget</td>\n",
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" <td>0</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>2</th>\n",
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" <td>Michael</td>\n",
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" <td>3</td>\n",
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" <td>Charles</td>\n",
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" <td>2</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>3</th>\n",
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" <td>Alice</td>\n",
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" <td>3</td>\n",
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" <td>Doug</td>\n",
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" <td>2</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>4</th>\n",
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" <td>Bridget</td>\n",
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" <td>3</td>\n",
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" <td>Mark</td>\n",
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" <td>2</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>5</th>\n",
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" <td>Charles</td>\n",
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" <td>Michael</td>\n",
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" <td>0</td>\n",
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" </tr>\n",
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" </tbody>\n",
@@ -167,12 +167,12 @@
167167
],
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"text/plain": [
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" user community\n",
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"0 Doug 0\n",
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"1 Mark 0\n",
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"2 Michael 3\n",
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"3 Alice 3\n",
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"4 Bridget 3\n",
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"5 Charles 0"
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"0 Alice 0\n",
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"1 Bridget 0\n",
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"2 Charles 2\n",
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"3 Doug 2\n",
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"4 Mark 2\n",
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"5 Michael 0"
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]
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},
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"execution_count": 4,

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