Commits

Branch selector

 master

User selector

jorgee

Datepicker

All time

Commit History

Commits on Dec 4, 2025

• Add URL encoding when revision name is used as HTTP query parameter (#6598)

  Show description for 7894e09
  

  jorgee

  and

  pditommaso

  authored
  7894e09

  Copy full SHA for 7894e09

Commits on Nov 28, 2025

• Optimize exit code handling by relying on scheduler status for successful executions (#6484)

  Show description for 454a2ae
  jorgee

  authored
  454a2ae

  Copy full SHA for 454a2ae

Commits on Nov 25, 2025

• Remove wiremock-groovy dependency and update tests using this dependecy (#6611) [ci fast]

  Show description for 6f4cf1a
  jorgee

  authored
  6f4cf1a

  Copy full SHA for 6f4cf1a

• fix security vulnerabilities for wiremock (#6607)

  Show description for 0f86933
  jorgee

  authored
  0f86933

  Copy full SHA for 0f86933

Commits on Nov 18, 2025

• Fix .command.stage file write when using Google Cloud (#6558)

  Show description for cda4ac1
  

  jorgee

  and

  bentsherman

  authored
  cda4ac1

  Copy full SHA for cda4ac1

• Revert Plugins.init() in run command to original location (#6568)

  Show description for ba6be77
  jorgee

  authored
  ba6be77

  Copy full SHA for ba6be77

Commits on Nov 13, 2025

• Fix unordered completed parts in AWS multipart upload. (#6560)

  Show description for 1020952
  

  jorgee

  and

  bentsherman

  authored
  1020952

  Copy full SHA for 1020952

Commits on Nov 4, 2025

• Fix Fusion license JWT token refresh by reusing TowerClient

  Show description for 498125d
  jorgee

  authored
  498125d

  Copy full SHA for 498125d

• Fix incorrect AWS region when specifying a S3 regional endpoint (#6530)

  Show description for 0989d31
  

  jorgee

  and

  pditommaso

  authored
  0989d31

  Copy full SHA for 0989d31

• Add default value to Apptainer pull timeout config paramter (#6534)

  Show description for f4548bd
  jorgee

  authored
  f4548bd

  Copy full SHA for f4548bd

Commits on Oct 22, 2025

• Fix no secrets in AWS Batch jobs (#6499) [ci fast]

  Show description for c76c325
  jorgee

  authored
  c76c325

  Copy full SHA for c76c325

Commits on Oct 21, 2025

• Prioritize Google Batch API exit codes with fallback to .exitcode file (#6498) [ci fast]

  Show description for 6ac2efc
  jorgee

  authored
  6ac2efc

  Copy full SHA for 6ac2efc

• Track remote input files in lineage (#6490)

  Show description for b0660ca
  jorgee

  authored
  b0660ca

  Copy full SHA for b0660ca

• Add .command.log redirection in K8s container command (#6455) [ci fast]

  Show description for e6eed79
  jorgee

  authored
  e6eed79

  Copy full SHA for e6eed79

• Add nextflow launch command (#6491) [ci fast]

  Show description for 7c8fa3d
  

  5 peopleauthored
  7c8fa3d

  Copy full SHA for 7c8fa3d

• Limit S3 client connections when using virtual threads (#6369)

  Show description for 295c60b
  

  3 peopleauthored
  295c60b

  Copy full SHA for 295c60b

Commits on Oct 6, 2025

• Fix pod log warning with Fusion enabled (#6449) [ci fast]

  Show description for 8c78b31
  

  3 peopleauthored
  8c78b31

  Copy full SHA for 8c78b31

Commits on Oct 3, 2025

• Get exit code from pod to manage OOM in k8s (#6442)

  Show description for f258a75
  

  jorgee

  and

  pditommaso

  authored
  f258a75

  Copy full SHA for f258a75

Commits on Sep 30, 2025

• Fix SIGTERM forwarding in AWS Batch jobs (#6414)

  Show description for abbef79
  

  3 peopleauthored
  abbef79

  Copy full SHA for abbef79

Commits on Sep 27, 2025

• Limit S3 concurrent downloads to fix Java Heap OOM (#6402)

  Show description for fd71d0e
  

  4 peopleauthored
  fd71d0e

  Copy full SHA for fd71d0e

Commits on Sep 24, 2025

• Fix unstage controls in command.run when using storeDir (#6364)

  Show description for a5756da
  

  jorgee

  and

  pditommaso

  authored
  a5756da

  Copy full SHA for a5756da

Commits on Sep 18, 2025

• fix build.yml e2e test trigger (#6415)

  Show description for 8e4e6ff
  jorgee

  authored
  8e4e6ff

  Copy full SHA for 8e4e6ff

Commits on Aug 11, 2025

• Update to plugin registry V1 (#6316)

  Show description for 9b1d1b6
  

  3 peopleauthored
  9b1d1b6

  Copy full SHA for 9b1d1b6

Commits on Jul 28, 2025

• Include eval commands in the task hash (#5517)

  Show description for b0fe0a9
  jorgee

  authored
  b0fe0a9

  Copy full SHA for b0fe0a9

• Fix Job arrays exceeding queueSize (#6314)

  Show description for fcf5b87
  jorgee

  authored
  fcf5b87

  Copy full SHA for fcf5b87

Commits on Jul 24, 2025

• Fix new plugins registry download when OCI repositories require tokens (#6303) [ci fast]

  Show description for 12fbef3
  jorgee

  authored
  12fbef3

  Copy full SHA for 12fbef3

• Fix AWS transfer manager anonymous fallback (#6296) [ci fast]

  Show description for ed5c99e
  

  jorgee

  and

  pditommaso

  authored
  ed5c99e

  Copy full SHA for ed5c99e

• Update nf-codecommit to AWS SDK v2 with corrected test (#6293) [ci fast]

  Show description for 1557a91
  

  jorgee

  and

  pditommaso

  authored
  1557a91

  Copy full SHA for 1557a91

Commits on Jul 14, 2025

• Fix silent failure when downloading a directory with AWS SDK v2 (#6266) [ci fast]

  Show description for 2d76d8f
  jorgee

  authored
  2d76d8f

  Copy full SHA for 2d76d8f

Commits on Jul 10, 2025

• Update nf-codecommit to AWS SDK v2 (#6263)

  Show description for 9e9476f
  jorgee

  authored
  9e9476f

  Copy full SHA for 9e9476f

Commits on Jul 9, 2025

• Add version, kind, and spec to lineage schema (#6075) [ci fast]

  Show description for 6328613
  

  jorgee

  and

  pditommaso

  authored
  6328613

  Copy full SHA for 6328613

Commits on Jul 6, 2025

• Upgrade to AWS Java SDK v2 (#6165)

  Show description for fc99b44
  

  4 peopleauthored
  fc99b44

  Copy full SHA for fc99b44

Commits on Jun 18, 2025

• Fix class not found exception Google Life science executor (#6193) [ci fast]

  Show description for 7bfb935
  jorgee

  authored
  7bfb935

  Copy full SHA for 7bfb935

Commits on Jun 16, 2025

• Fix same Conda env is re-created for same module (#6166) [ci fast]

  Show description for b46f01f
  

  jorgee

  and

  pditommaso

  authored
  b46f01f

  Copy full SHA for b46f01f

Commits on May 20, 2025

• Add Failsafe retry mechanism in K8s (#6083) [ci fast]

  Show description for 9e675c6
  

  jorgee

  and

  pditommaso

  authored
  9e675c6

  Copy full SHA for 9e675c6

Pagination

Previous

Next