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bcRflow

A Nextflow Pipeline for Characterizing B-cell Receptor Repertoires from Non-targeted Transcriptomic Data
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Welcome to the bcRflow landing page! This pipeline was developed at the Bioinformatics Core through the University of Pittsburgh Department of Pediatrics, Division of Health Informatics. Please see the Workflow folder for detailed documentation, usage, and acknowledgements.

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bcRflow: A Nextflow Pipeline for the Comprehensive and Reproducible Analysis of B-Cell Receptor Repertoires from Transcriptomic Data

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  • R 67.3%
  • Nextflow 25.8%
  • Python 3.1%
  • Dockerfile 2.3%
  • Shell 1.5%