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Working from Earth
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CHENyiru3/README.md

👋 Hi, I'm Yiru Chen（陈奕儒） | v2026.04.05

🧬 Incoming PhD Student @ Duke-NUS Medicine School, QBM Program (Fall 2026)

Decoding biomedical complexity through the lens of AI and algorithms.

🔍 Research Interests & Focus

  • Spatial Omics & Single-cell Analysis: Developing deep learning frameworks to uncover spatial patterns.
  • Representation Learning: Multi-omics integration and latent space modeling.
  • AI for Science: Leveraging machine learning to accelerate biomedical discovery.
  • Alumna: B.S. in Bioinformatics @ ZJU-UoE Institute (Zhejiang University & University of Edinburgh).

🌐 Digital Footprints

📫 Get in Touch

"Keep on keeping on!"

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  1. gerdos/PyRAMA gerdos/PyRAMA Public

    Python implementation of the Ramachandran plot

    Python 56 14

  2. maiziezhoulab/FEAST maiziezhoulab/FEAST Public

    From slices to space: parameter-cloud simulation and 3D interpolation of spatial transcriptomics

    Jupyter Notebook 1

  3. LineageMap LineageMap Public

    Forked from ZhangLabGT/LineageMap

    Reconstructing Spatially Resolved Cell Lineage Trees from Single-Cell Multi-Omics Data with LineageMap

    R

  4. My_Notes_Four_ZJE My_Notes_Four_ZJE Public

    This is a personal but open-source repo for everyone. Hope I can give you a little help in ZJE. Please feel free to raise up any question.

    Python 7 2