GitHub - Rhoana/feature-computation: Feature computation code for Rhoana using opencv and HDF5

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 20 Commits
.gitignore		.gitignore
Makefile		Makefile
README.txt		README.txt
adapthisteq.cpp		adapthisteq.cpp
compute_features.cpp		compute_features.cpp
drawhist.cpp		drawhist.cpp
local_statistics.cpp		local_statistics.cpp
membrane.cpp		membrane.cpp
opencv_hdf5.cpp		opencv_hdf5.cpp
predict_gb.cpp		predict_gb.cpp
predict_randomforest.cpp		predict_randomforest.cpp
quickmedian.h		quickmedian.h
show_all_features.py		show_all_features.py
show_features.cpp		show_features.cpp
sketch_on_image.cpp		sketch_on_image.cpp
tensor_gradient_features.cpp		tensor_gradient_features.cpp
test_image_to_hdf5.cpp		test_image_to_hdf5.cpp
test_quickmedian.cpp		test_quickmedian.cpp
train_gb.cpp		train_gb.cpp
train_randomforest.cpp		train_randomforest.cpp
vesicles.cpp		vesicles.cpp

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Usage:

Training
  compute_features IMAGE_1.tif FEATURES_1.hdf5
  compute_features IMAGE_2.tif FEATURES_2.hdf5
  ...
  sketch_on_image IMAGE_1.tif TRAIN_1.tif
  (Green/LeftButton = foreground, Red/RightButton = Background)
  train_{gb,randomforest} TRAIN_1.tif FEATURES_1.hdf5 TRAIN_2.tif FEATURES_2.hdf5 ...
  predict_{gb,randomforest} {GB/forest}.xml FEATURES_1.hdf5
    (will show output)
  (repeat sketch/train/predict)

  predict_{gb,randomforest} {GB/forest}.xml FEATURES_1.hdf5 PREDICTION_1.hdf5