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Merged
merged 4 commits into from
Aug 7, 2020
Merged

DEU tutorial fix #298

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665f175
update DEU deps
Aug 7, 2020
4bb5999
clean-up DEU
Aug 7, 2020
cd6e581
Update Project.toml
ChrisRackauckas Aug 7, 2020
108d530
Update tutorials/DiffEqUncertainty/02-AD_and_optimization.jmd
ChrisRackauckas Aug 7, 2020
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30 changes: 1 addition & 29 deletions tutorials/DiffEqUncertainty/01-expectation_introduction.jmd
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Original file line number Diff line number Diff line change
Expand Up @@ -358,32 +358,4 @@ The performance gains realized by leveraging batch GPU processing is problem dep
```{julia; echo=false; skip="notebook"}
using SciMLTutorials
SciMLTutorials.tutorial_footer(WEAVE_ARGS[:folder],WEAVE_ARGS[:file])
```


<!--
## Batch + nout
```julia
using DiffEqGPU

function f(du, u,p,t)
@inbounds begin
du[1] = p[1]*u[1];
end
nothing
end

u0 = Float32[10.0]
p = Float32[-0.3]
tspan = (0.0f0,10.0f0)
prob = ODEProblem(f,u0,tspan,p)

g(sol) = [sol(4.0)[1], sol(6.0)[1]]

u0_dist = [truncated(Normal(3.0f0,2.0f0),-5f0,11f0)]
p_dist = [truncated(Normal(-.7f0, .1f0), -1f0,0f0)]

expectation(g, prob, u0_dist, p_dist, Koopman(), Tsit5(), EnsembleGPUArray();
quadalg = CubaSUAVE(), batch=1000, nout=2)[1]
```
-->
```
9 changes: 2 additions & 7 deletions tutorials/DiffEqUncertainty/02-AD_and_optimization.jmd
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Expand Up @@ -277,7 +277,7 @@ The probability of impacting the wall is now
```
We can check if this is within tolerance by
```julia
isapprox(λ, 0.01, atol=1e-5)
abs(λ - 0.01) <= 1e-5
```

Again, we plot some Monte Carlo simulations from this result as follows
Expand All @@ -302,12 +302,7 @@ begin
end
```



## Conclusion


```{julia; echo=false; skip="notebook"}
using SciMLTutorials
SciMLTutorials.tutorial_footer(WEAVE_ARGS[:folder],WEAVE_ARGS[:file])
```
```
4 changes: 4 additions & 0 deletions tutorials/DiffEqUncertainty/Project.toml
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Expand Up @@ -5,9 +5,11 @@ DiffEqSensitivity = "41bf760c-e81c-5289-8e54-58b1f1f8abe2"
DiffEqUncertainty = "ef61062a-5684-51dc-bb67-a0fcdec5c97d"
DifferentialEquations = "0c46a032-eb83-5123-abaf-570d42b7fbaa"
Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
NLopt = "76087f3c-5699-56af-9a33-bf431cd00edd"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
Quadrature = "67601950-bd08-11e9-3c89-fd23fb4432d2"

[compat]
BenchmarkTools = "0.5"
Expand All @@ -16,6 +18,8 @@ DiffEqSensitivity = "6.28"
DiffEqUncertainty = "1.5"
DifferentialEquations = "6.15"
Distributions = "0.23"
ForwardDiff = "0.10"
NLopt = "0.6"
OrdinaryDiffEq = "5.42"
Plots = "1.5"
Quadrature = "1.3"