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Merged
briandrawert merged 34 commits into from
Sep 29, 2020
Merged

Fix data function #54

briandrawert merged 34 commits into from
Sep 29, 2020

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@briandrawert briandrawert commented Sep 13, 2020

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briandrawert and others added 30 commits July 8, 2020 19:53
@briandrawert
Need to clean forces in step 1
7f8d3b7
@briandrawert
reworking rdme
d0c57fe
@briandrawert
adding new list types
d40ee8d
@briandrawert
Merge branch 'develop' of github.com:spatialpy/SpatialPy into fix_dat…
e9053c2 
…a_function
@briandrawert
NSM refactor in progress
6a286e0
@briandrawert
linked lists refactored
fcdddbc
@briandrawert
find_neighbor() now does all neighbor distance/diffusion compuataions
035edac
@briandrawert
Python fixes
11870a7
@briandrawert
compile errors
4e835b7
@briandrawert
more debugging
e1cb95b
@briandrawert
compiling
4797f68
@briandrawert
more debugging
3b389ce
@briandrawert
compile errors fixed
76d3272
@briandrawert
fix bug in VTKreader, fail on blank lines
f606aff
@briandrawert
Sorting the neighbors to prevent bias in diffusion direction
b3fa2e9
@briandrawert
pushing notebook
22c671b
@briandrawert
ability to disable RDME computation
07e4488
@makdl
Fixed bug in diffusion, major bug still exists
44ce400
@briandrawert
saving work
14702c6
@briandrawert
diffusion test works correctly
ead130c
@briandrawert
merge
61bc7ef
@briandrawert
All this so it will work with spaces in the folder names
bcecb1f
@makdl
Updated cdc42 notebook
d98477b
@makdl
Reduced plotting output due to large file size
e830936
@briandrawert
Fixed bug that was causing CylinderDemo to run incorrectly
df0885c
@briandrawert
Merge branch 'test_fix_data_function' of github.com:spatialpy/Spatial…
4b633df 
…Py into test_fix_data_function
@briandrawert
removing density filter for wall particles
8042faa
@briandrawert
Wall particles do need to change density in non-static simulations
e891577
@makdl
Updated diffusion & cdc42
deb69a2
@makdl
Added diffusion reaction debug model
dc1323e
@briandrawert briandrawert merged commit 52fc376 into develop Sep 29, 2020
@briandrawert briandrawert deleted the test_fix_data_function branch September 29, 2020 19:11
@briandrawert briandrawert restored the test_fix_data_function branch September 30, 2020 17:51
@makdl makdl deleted the test_fix_data_function branch February 25, 2021 21:31
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3 participants

@briandrawert @makdl