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TGSAI / mdio-python Public

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Move to Zarr v3 as default for on disk storage format#630

Merged

tasansal merged 15 commits intov1TGSAI/mdio-python:v1from

zarr-v3-serializationTGSAI/mdio-python:zarr-v3-serializationCopy head branch name to clipboard

Sep 6, 2025

Conversation Commits15 (15)Checks Files changed

Merged

Move to Zarr v3 as default for on disk storage format#630
tasansal merged 15 commits intov1from
zarr-v3-serialization

Commits

Commits on Sep 5, 2025

remove all zarr v2 refs and fix fill_value attributes
tasansal
committed
fix codec initialization for zarr3
tasansal
committed
use correct kwargs for compressor definition
tasansal
committed
fix fill value for structs
tasansal
committed
fix numpy imports
tasansal
committed
fix creation logic
tasansal
committed
make numpy import namespace
tasansal
committed
ensure fill value is correct for structured arrays
tasansal
committed
fill value all fields
tasansal
committed
remove legacy test for bug in v2
tasansal
committed
fix codec related issues and warning spamming
tasansal
committed

Commits on Sep 6, 2025

use UPath instead of StorageLocation and remove all v0 stuff
tasansal
committed
undo warning suppression for now
tasansal
committed
remove v0 dataset schema
tasansal
committed
make immutable metadata tuples, performance optimizations. consistent code styling as well
tasansal
committed

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