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1. PureML PureML Public

   Transparent, NumPy-only deep learning framework for teaching, small-scale projects, prototyping, and reproducible experiments. No CUDA, no giant dependency tree. Batteries included: VJP autograd, l…

   Python 11 1

2. SAWNERGY SAWNERGY Public

   Toolkit for transforming molecular dynamics (MD) trajectories into rich graph representations, sampling random and self-avoiding walks, learning node embeddings, and visualising residue interaction…

   Python

3. microbiome2function microbiome2function Public

   Forked from BonhamLab/microbiome2function

   UniProt-to-ML toolkit for microbiome function prediction with cleaning, embeddings, and GNN/FFNN data interfaces.

   Python