Published scientific manuscript:
Harry AV. Evidence for systemic age underestimation in shark and ray ageing studies. Fish Fish. 2017;00:1–16. https://doi.org/10.1111/faf.12243
To reproduce analysis run source("run_all.R").
Repository structure:
/
├── age-underestimation.Rproj
├── analysis
│ ├── data prep.R
│ ├── setup.R
│ └── summary.R
├── data
│ ├── data.csv
│ ├── data1.csv
│ └── definitions.csv
├── readme.md
├── references
│ ├── Age underestimation extra.bib
│ ├── Age underestimation.bib
│ └── fish-and-fisheries.csl
├── reports
│ ├── Figures.pdf
│ ├── Figures.tex
│ ├── Figures_files
│ ├── Manuscript.pdf
│ ├── Manuscript.tex
│ ├── Supplementary material 2.pdf
│ ├── Supplementary material 2.tex
│ ├── Supplementary material.pdf
│ ├── Supplementary material.tex
│ ├── Supplementary material_files
│ ├── Tables.pdf
│ └── Tables.tex
├── rmds
│ ├── Figures.Rmd
│ ├── Manuscript.Rmd
│ ├── Supplementary material 2.Rmd
│ ├── Supplementary material.Rmd
│ └── Tables.Rmd
└── run_all.R
Erratum
- The scientific name for Thorny Skate (Amblyraja radiata) was mistakenly given as that for the Winter Skate (Leucoraja ocellata) throughout the paper and vice versa.