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A tiny script for displaying Nciplot surfaces in PyMOL

Python 4 1 Updated Feb 19, 2014

Development versions of the g-xTB method. Final implementation will not happen here but in tblite (https://github.com/tblite/tblite).

197 12 Updated May 14, 2026
Python 2 Updated Jun 26, 2026
Python 24 3 Updated Dec 15, 2025

Build your personal knowledge base with Trilium Notes

TypeScript 36,704 2,462 Updated Jul 4, 2026

pywindow is a Python package for structural analysis of discrete molecules with voids and windows, individually, in molecular systems and molecular dynamics trajectories of these.

Python 25 9 Updated Sep 29, 2025

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

Python 331 87 Updated Jan 7, 2026

This is the repository for the Stmol project, a Streamlit component that uses py3Dmol to render molecules.

Python 211 37 Updated Dec 6, 2023

Standalone charge assignment from Espaloma framework.

Python 47 8 Updated Oct 10, 2025

A COMPLETELY UNOFFICIAL curated list of projects, tools, documentation and resources related to the Framework Laptop

133 2 Updated Oct 19, 2023

Build your personal knowledge base with TriliumNext Notes

TypeScript 2,924 152 Updated Jun 24, 2025

A text-guided diffusion model for crystal structure generation

Python 80 20 Updated May 30, 2025

Collection of tools to help initialize and manipulate geometries in two and three dimensions.

Python 24 5 Updated Jul 2, 2026

Make better chemistry documentation!

Python 15 Updated Nov 20, 2024

A high performance Python graph library implemented in Rust.

Rust 1,718 214 Updated Jul 3, 2026

An interactive structure/property explorer for materials and molecules

TypeScript 180 43 Updated Jun 28, 2026

An extremely fast Python linter and code formatter, written in Rust.

Rust 48,409 2,210 Updated Jul 3, 2026

A fragment-based molecular assembly toolkit

Python 47 1 Updated Jun 26, 2026

Converts an xyz file to an RDKit mol object

Python 300 68 Updated Jan 22, 2025

Store your chemical data in a single file!

Python 13 1 Updated May 7, 2025

A GUI to support data-driven optimisation for chemical tasks

HTML 1 Updated May 22, 2024

Jupyter notebooks and other resources for Think Python by Allen Downey, published by O'Reilly Media.

Jupyter Notebook 2,676 1,056 Updated Mar 8, 2026

Coarse-graining Hybrid and Inorganic Crystals (CHIC) is a Python package for automating the cleaning-up and coarse-graining of crystals and analysing crystal databases using machine-learning.

Python 15 Updated Nov 18, 2024

C-library for calculating Solvent Accessible Surface Areas

C 196 44 Updated May 31, 2026

Coarse-grained Diffusion for Metal-Organic Framework Design

Python 64 11 Updated Jun 18, 2024

Master the command line, in one page

161,497 14,827 Updated Jun 25, 2024

Automated calculation of cavity in molecular cages

Python 27 4 Updated Dec 7, 2025

A package for Covalent Organic Frameworks structure assembly based on specific building block, topology and functional groups based on the reticular approach

Python 66 6 Updated Jun 5, 2026
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