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[SPARK-21534][SQL][PySpark] PickleException when creating dataframe from python row with empty bytearray #19085

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[SPARK-21534][SQL][PySpark] PickleException when creating dataframe from python row with empty bytearray #19085

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a362d6b
Add custom ByteArrayConstructor to unpickle empty byte array.
viirya Aug 30, 2017
c7dda23
Address comments.
viirya Aug 30, 2017
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14 changes: 14 additions & 0 deletions core/src/main/scala/org/apache/spark/api/python/SerDeUtil.scala
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Original file line number Diff line number Diff line change
Expand Up @@ -35,6 +35,16 @@ import org.apache.spark.rdd.RDD

/** Utilities for serialization / deserialization between Python and Java, using Pickle. */
private[spark] object SerDeUtil extends Logging {
class ByteArrayConstructor extends net.razorvine.pickle.objects.ByteArrayConstructor {
override def construct(args: Array[Object]): Object = {
// Deal with an empty byte array pickled by Python 3.
if (args.length == 0) {
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@HyukjinKwon HyukjinKwon Aug 30, 2017

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I see. It looks quite straightforward. I checked in Python 3:

>>> import pickle
>>> import pickletools
>>> print(pickletools.dis(pickle.dumps(bytearray())))
    0: \x80 PROTO      3
    2: c    GLOBAL     'builtins bytearray'
   22: q    BINPUT     0
   24: )    EMPTY_TUPLE
   25: R    REDUCE
   26: q    BINPUT     1
   28: .    STOP

which, up to my knowledge, gives new object[0] for args.

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@HyukjinKwon HyukjinKwon Aug 30, 2017

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I also checked pickle.dumps(..., protocol=0 - 4) just in case.

Array.emptyByteArray
} else {
super.construct(args)
}
}
}
// Unpickle array.array generated by Python 2.6
class ArrayConstructor extends net.razorvine.pickle.objects.ArrayConstructor {
// /* Description of types */
Expand Down Expand Up @@ -108,6 +118,10 @@ private[spark] object SerDeUtil extends Logging {
synchronized{
if (!initialized) {
Unpickler.registerConstructor("array", "array", new ArrayConstructor())
Unpickler.registerConstructor("__builtin__", "bytearray", new ByteArrayConstructor())
Unpickler.registerConstructor("builtins", "bytearray", new ByteArrayConstructor())
Unpickler.registerConstructor("__builtin__", "bytes", new ByteArrayConstructor())
Unpickler.registerConstructor("_codecs", "encode", new ByteArrayConstructor())
initialized = true
}
}
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4 changes: 3 additions & 1 deletion python/pyspark/sql/tests.py
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Expand Up @@ -2383,9 +2383,11 @@ def test_read_text_file_list(self):

def test_BinaryType_serialization(self):
# Pyrolite version <= 4.9 could not serialize BinaryType with Python3 SPARK-17808
# The empty bytearray is test for SPARK-21534.
schema = StructType([StructField('mybytes', BinaryType())])
data = [[bytearray(b'here is my data')],
[bytearray(b'and here is some more')]]
[bytearray(b'and here is some more')],
[bytearray(b'')]]
df = self.spark.createDataFrame(data, schema=schema)
df.collect()

Expand Down