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Pyzotero: a Python client for the Zotero API
Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.
AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.
Shared repo for PECO-buddy hackathon project for Evidence Synthesis Hackathon (ESHackathon) 2024: https://www.eshackathon.org/events/2024-12-newcastle.html
Running R Scripts on a Schedule with GitHub Actions
Why multiple hypothesis test corrections provide poor control of false positives in the real world
Repository for an automated microscopy image analysis pipeline (CryptoClassifier), using ImageJ.
An R package for exploring data from the MLA International Bibliography exported to RIS format
Analysing Sewage Information from the UK Environment Agency
Source code for https://rpsychologist.com
A reproducible academic paper, written in R Markdown, examining the impact of journal data-sharing policies on data availability statements.
A demonstration of Richard Levins' metapopulation model (1969)
Contains all code used for a meta-analysis on the effect of urbanization on biodiversity
This repository contains all R code and data used for a project on the use of meta-analysis of both means and variance in ecology and evolution.
❗ This is a read-only mirror of the CRAN R package repository. KappaGUI — An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
This repository contains simulated data and associated code for the manuscript 'Evolution reverses the effect of network structure on metapopulation persistence.'
Development of Farm simulation application, an example for gamification in higher education
Accurate sample inference from amplicon data with single nucleotide resolution