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Updated BioSQL wiki page to reflect the latest version #136

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Updated BioSQL wiki page to reflect the latest version #136

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eefb2b3
Add cygwin instructions
leptoceratops Sep 20, 2018
190dcb7
forgot parenthesis
leptoceratops Sep 20, 2018
65ce8e3
sql not scripts
leptoceratops Sep 20, 2018
c8e57f6
Update BioSQL.md
leptoceratops Sep 20, 2018
43de72b
added description of relevant files
leptoceratops Sep 20, 2018
d7e6acb
correct small typo "scripts"
leptoceratops Sep 20, 2018
bde029a
added more details about running the perl script
leptoceratops Sep 20, 2018
8732ab1
some more package details
leptoceratops Sep 20, 2018
af4272c
better English
leptoceratops Sep 20, 2018
4dcd7ad
remove "as well" typo
leptoceratops Sep 20, 2018
cbd815b
better English
leptoceratops Sep 20, 2018
82f4828
added "so"
leptoceratops Sep 20, 2018
be85e45
biosql.ini.sample instructions
leptoceratops Sep 20, 2018
cb79aa9
inside biosql.ini
leptoceratops Sep 20, 2018
d4f4351
_mysql_connector
leptoceratops Sep 20, 2018
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added description of relevant files
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leptoceratops authored Sep 20, 2018
commit 43de72ba204d2bd01fef0c9d6f215889b41373f3
3 changes: 3 additions & 0 deletions wiki/BioSQL.md
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Expand Up @@ -90,6 +90,9 @@ repository at (https://github.com/biosql/biosql.git)
``` bash
svn export https://github.com/biosql/biosql.git/trunk biosql
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@peterjc peterjc Sep 24, 2018

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Again, avoid recommending the legacy tool svn here - we want any potential contributors to use git so:

git clone https://github.com/biosql/biosql.git
cd biosql

Or, for a simple snapshot:

wget https://github.com/biosql/biosql/archive/master.tar.gz
tar -zxvf master.tar.gz
cd biosql-master/

```
The two files that are needed are the following:
1. biosqldb-mysql.sql -- the BioSQL schema -- found inside the **sql** subfolder
2. load_ncbi_taxonomy.pl -- the Perl script to populate the database -- found inside the **scrpts** subfolder

Creating the empty database
---------------------------
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