cfDNA analysis workflow

explore alphafold

Code and data for high accuracy assessment in CASP14

Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from data mining to deep learning.

An attempt at a paper a day

Analysis code for NAR manuscript

This repository contains a protocol to analyse RNA-seq data, focusing on alternative splicing & polyadenylation, authored by Oliver Ziff. The contents are based on multiple resources including the …

Dive into Deep Learning: an interactive deep learning book with code, math, and discussions

Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.

Models, design algorithms, and other software related to Salis lab publications

Webscraping and data analysis of DNA with pandas and Selenium

Analysis of single cell RNA-seq data course

Text Classification Algorithms: A Survey

A repo containing code covering various aspects of deep learning on Pytorch. Great for beginners and intermediate in the field

Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.

Personal project to understand GANs better

The Hitchhiker's Guide to Data Science for Social Good

Uniform Manifold Approximation and Projection

Data Science Using Python

A complete ML study path, focused on TensorFlow and Scikit-Learn

Java tools for analyzing Drop-seq data

A tool that allows to get UMI counts from a single cell protein assay

A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data