roi-timecourses

Code for extracting FIR timecourses for ROIS using marsbar.

For each subject and ROI, a FIR timecourse is extracted and saved as both a matlab structure and a .csv file.

Dependencies

• spm12
• marsbar-0.44

Key scripts

• config.m = specify variables and pathsin this file
• extract_timecourses.m = script that extracts the FIR timecourses

Inputs

• ROI(s) must have been extraced from marsbar and save as .mat files. ROI names cannot include dashes(-) and must have the following pattern *_roi.mat

Output

• Structure $timecourses saved to $output_dir as a .mat file
• Table $datatable saved to $output_dir as a .csv file

More information about the marsbar code can be found here