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hspe: hybrid-scale proportions estimation

a method for cell-type deconvolution

Software

hspe is an R package for cell type deconvolution.

  • The R package is available here.

Vignettes

  • An example of how to hspe is available here here (html rmd)

Papers

1. "The Role of Scale in the Estimation of Cell-type Proportions" (Pre-print)

  • Our new pre-print on the role of scale in cell-type deconvolution is accessible here

  • Our docker image for reproducing the analysis in paper can be found here.

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hybrid-scale proportions estimation

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