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alphafold3 Public
Forked from google-deepmind/alphafold3AlphaFold 3 inference pipeline.
Python Other UpdatedMar 6, 2026 -
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torchspy Public
A lightweight tool for saving intermediate tensors and tracing module execution during PyTorch forward passes.
HTML MIT License UpdatedDec 23, 2025 -
mdtraj Public
Forked from mdtraj/mdtrajprivate modified version of mdtraj
Python GNU Lesser General Public License v2.1 UpdatedJan 15, 2025 -
nurikit Public
Forked from iitp-ppi/nurikit*The* fundamental software platform for chem- and bio-informatics
C++ Apache License 2.0 UpdatedJan 14, 2025 -
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POVME Public
Forked from durrantlab/POVMEDetect and characterize binding pockets from molecular simulations, but with Conda
Python GNU General Public License v3.0 UpdatedJan 2, 2025 -
getcontacts Public
Forked from getcontacts/getcontactsLibrary for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
Python Apache License 2.0 UpdatedDec 2, 2024