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Achievement: Pull Sharkx2Achievement: Pair Extraordinaire

Achievements

Achievement: Pull Sharkx2Achievement: Pair Extraordinaire

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  1. Molmed/irma-scripts Molmed/irma-scripts Public

    Stand-alone scripts deployed to Irma

    Python 1 7

  2. NationalGenomicsInfrastructure/miarka-provision NationalGenomicsInfrastructure/miarka-provision Public

    Ansible playbooks for provisioning NGI cluster Miarka

    Jinja 1 16

  3. nf-core/seqinspector nf-core/seqinspector Public

    Dedicated QC-only pipeline for sequencing data. The pipeline will run a (potentially large) set of QC tools and can output global and group specific Multiqc reports. The pipeline is targeting core …

    Nextflow 24 40

  4. nf-core/sarek nf-core/sarek Public

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    Nextflow 557 526

  5. Molmed/seqreports Molmed/seqreports Public

    This is a Nextflow pipeline for generating sequencing reports for the SNP&Seq Technology platform, NGI Uppsala, SciLifelab Genomics.

    Python 2 11

  6. proQ_mutagenesis proQ_mutagenesis Public

    Python