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[ENH] Add GenericLabel to ANTS ApplyTransforms. #3617

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Merged
merged 2 commits into from
Dec 6, 2023
Merged

[ENH] Add GenericLabel to ANTS ApplyTransforms. #3617

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50be1a4
Add GenericLabel to ANTS ApplyTransforms.
tsalo Dec 5, 2023
0114009
Address @effigies' review.
tsalo Dec 5, 2023
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3 changes: 3 additions & 0 deletions nipype/interfaces/ants/resampling.py
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Original file line number Diff line number Diff line change
Expand Up @@ -349,6 +349,7 @@ class ApplyTransformsInputSpec(ANTSCommandInputSpec):
"MultiLabel",
"Gaussian",
"BSpline",
"GenericLabel",
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I think you need to add traits.Tuple(traits.Str()) to interpolation_parameters options, as well.

argstr="%s",
usedefault=True,
)
Expand All @@ -357,6 +358,7 @@ class ApplyTransformsInputSpec(ANTSCommandInputSpec):
traits.Tuple(
traits.Float(), traits.Float() # Gaussian/MultiLabel (sigma, alpha)
),
traits.Tuple(traits.Str()), # GenericLabel
)
transforms = InputMultiObject(
traits.Either(File(exists=True), "identity"),
Expand Down Expand Up @@ -497,6 +499,7 @@ def _format_arg(self, opt, spec, val):
"BSpline",
"MultiLabel",
"Gaussian",
"GenericLabel",
] and isdefined(self.inputs.interpolation_parameters):
return "--interpolation {}[ {} ]".format(
self.inputs.interpolation,
Expand Down