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Just discovered the following problem:
The data on my server lies on a seperate RAID and the users mount their folders via SFTP into their owncloud. Tonight there occured a problem mounting the RAID. After I started my laptop (with owncloud-client in autostart) the client deleted all the data from the mounts on the laptop - without a prompt or anything - before I could read the notification mail about the mounting problem.
Would be good if the synchronisation gets paused for external mounts if they can not be mounted.
After I solved the mount problem I discovered that all my shares have been deleted (not shared anymore).
Some data on my setup (irrelevant in this case, I guess):
Server: Ubuntu, owncloud 7.0.4 stable
Client: Arch, 1.7.1