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ythaworn/README.md

Research Fellow, Yang Lab


Hi there 👋

  • 🦟 Currently working on the phylogeny and evolution of malaria mosquitoes (Anopheles) in North America
  • 🪰 Research areas: phylogenetics, computational statistics, evolutionary genomics
  • 🐝 Currently learning: genome assembly, infectious disease epidemiology
  • 🐛 Looking to collaborate on mosquito phylogeny and evolution, inference of gene flow
  • 🪲 Ask me about phylogenetics and gene flow
  • 🐞 ORCID: 0000-0002-5453-2569
  • 🐙 More at ythaworn.github.io

Training & Research Experience


Current projects

  • Phylogeny and evolution of Anopheles mosquitoes (Diptera: Culicidae: Anophelinae) in North America: specimens
  • Multispecies coalescent methods for inferring gene flow from genomic data
  • Bioinformatics pipeline for generating multilocus data from short-read sequencing data
  • Introgression histories in Heliconius butterflies (Lepidoptera: Nymphalidae: Heliconiinae: Heliconiini)
  • Taxonomic catalogue of Heliconiinae (Lepidoptera: Nymphalidae)

Popular repositories Loading

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    A tool for genotyping Mycobacterium tuberculosis isolates from WGS data

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  2. snpplet snpplet Public

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  3. iimmsci2s iimmsci2s Public

    Calculate pseudo-true parameter values in migration models by minimizing KL divergence

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  4. multilocus multilocus Public

    Generate multilocus sequence data from short reads

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  5. ythaworn.github.io ythaworn.github.io Public

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  6. dvrcaller dvrcaller Public

    Infer DVR deletion pattern of Mycobacterium tuberculosis from short reads data

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