Martini Force Field Initiative

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GROMACS error due to missing angle in martini_v3.0_ILs_MC3_dev_v1

Vickteniola started Mar 12, 2026 in Lipids

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Lincs error with martin3 after 22 microseconds of simulation

groponp asked Mar 9, 2026 in Q&A · Unanswered

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Mapping file for PPC (C16/C18) Martini Lipidome 2

Pbagchi05 started Feb 17, 2026 in Lipids

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Issue with orienting two monomers during dimer insertion in GoMARTINI membrane system

Asharuthra started Feb 16, 2026 in Proteins

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How to Generate Titratable Protein ITP Files for Martini 3 CG Simulations at Different pH Conditions?

gaofeiyan started Dec 16, 2025 in Proteins

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Gold nanoparticles (AuNPs) with protein

ZhiChai started Jan 26, 2026 in Other molecules

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Martinize2 can not separate my protein chains...

MarcosAR94 started Jan 23, 2026 in Proteins · Closed

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ERROR 1 [file nucp.itp, line 194]: Atomtype nucp_1 not found

russellb23 started Jan 9, 2026 in General · Closed

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Changes in GROMACS 2025.4 cause warning and simulation failure when following Lipid bilayers - Part I tutorial

digispiders started Jan 3, 2026 in Tutorials

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Coarse-graining PAMA polymers with polyply, AutoMartini-M3, bartender, and martinize2

jotelha started Dec 2, 2025 in Polymers

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CG to AA backmapping

ubaidmalik3780-hash asked Nov 27, 2025 in Q&A · Unanswered

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Martini simulations for finding native conformation of a protein complex

jochuan started Nov 13, 2025 in Proteins

5
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Calcium ions in Martini3, small or tiny bead?

fralavore-ux started Nov 13, 2025 in Martini Philosophy

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Martini 3 CHOL

karlkirschner started Sep 3, 2025 in Lipids

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Questions about water beads (W vs WF) in Martini 2.1 and LLPS simulations

chagnart-design asked Oct 1, 2025 in Q&A · Unanswered

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protein-rna complexes

margaritacolberg started Sep 25, 2025 in Nucleic acids · Closed

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Where can obtain the martini3 force field for oxygen?

xinyuren-bio asked Sep 23, 2025 in Q&A · Unanswered

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Setting constraints and bonds on a new small molecule

nicoleyshebbel asked Jul 16, 2025 in Q&A · Unanswered

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bonded parameter types for DNA/RNA

PepperLee-sm started Jul 10, 2025 in Nucleic acids

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MD position restraints (PR) problem on my dsDNA molecule

sergio-garay started Sep 19, 2025 in Nucleic acids

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building hbond bead

yuhaihaiyu started Sep 18, 2025 in General

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MARTINI3 Nucleobase Mapping for DNA/RNA

FirminoVinicius started Aug 27, 2025 in Nucleic acids

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Use Martini2 lipids with martini3 protein

F-GST started Jul 9, 2025 in Lipids

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Use salt types other than NaCl

chrom-vt started Jul 7, 2025 in General

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Martini3-IDP and lincs errors?

jessniblo started Jun 17, 2025 in Proteins

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